Citations & Publications
| Select Publication Titles | Author | Journal | MCLAB Product/ Service Used | |
| 1 | Activation of HIV Transcription by the Viral Tat Protein Requires a Demethylation Step Mediated by Lysinespecific Demethylase 1 (LSD1/KDM1) | Sakane et al (2011) | PLoS Pathog 7(8): e1002184 | 2X HotSybr Real-time PCR Mix |
| 2 | Molecular Mechanisms of Bortezomib Resistant Adenocarcinoma Cells |
Susuki et al (2011) | PLoS ONE 6(12): e27996 |
Sanger sequencing service: b5, b1, LMP7, LMP2 and b7 subunits |
| 3 | Functional Mutation of Multiple Solvent-Exposed Loops in the Ecballium elaterium Trypsin Inhibitor-II Cystine Knot Miniprotein | Kimura et al (2011) | PLoS ONE 6(2): e16112 | Sanger sequencing service |
| 4 | The Functional Significance of MicroRNA-145 in Prostate Cancer | Zaman et al (2010) | Br J Cancer. 2010 July 13; 103(2): 256–264. | Sanger sequencing service |
| 5 | Characterization of 12 Polymorphic Microsatellite Loci in Ifremeria nautilei, a Chemoautotrophic Gastropod From Deep-sea Hydrothermal Vents | Thaler et al (2010) | Conservation Genet Resour On-line, Jan 9, 2010 | Size Standards |
| 6 | miRNAs Regulate SIRT1 Expression During Mouse Embryonic Stem Cell Differentiation and In Adult Mouse Tissues | Saunders et al (2010) | AGING, July 2010, Vol. 2. No 7 pg. 415-431 | 2X HotSybr Real-time PCR Mix |
| 7 | Discovery of a New Population of Juniperus Gracilior var. urbaniana from the Domenican Republic: Analysis of Leaf Terpenoids and SNPS from nrDNA and trnC-trnD | Adams et al (2010) | Phytologia 92(3): 413-423 (December 1, 2010). | Sanger sequencing service |
| 8 | First Report of the Detection of Candidatus liberibacter Species in Zebra Chip Disease Infected Potato Plants in the United States |
Abad et al (2009) | Plant Disease – 93(1):108 | Sanger sequencing service |
| 9 | Functional Significance of Wnt Inhibitory Factor-1 Gene in Kidney Cancer |
Kawakami et al (2009) | Cancer Res November 15, 2009 69; 8603 | Sanger sequencing service |
| 10 | BTG3 Tumor Suppressor Gene Promoter Demethylation, Histone Modification And Cell Cycle Arrest By Genistein In Renal Cancer |
Majid et al (2009) | Carcinogenesis (2009) 30 (4): 662670 |
Sanger sequencing service |
| 11 | Vibrio sp. As A potentially Importantmember of the Black Band Disease (BBD) Consortium in Favia sp. Corals | Arotsker et al (2009) | FEMS Microbiol Ecol 70 (2009) pg. 515–524 | Sanger sequencing service |
| 12 | Ethylene Involvement In The Regulation of the H+-ATPase CsHA1 Gene And Of The New Isolated Ferric Reductase CsFRO1 and Iron Transporter CsIRT1 Genes in Cucumber Plants | Waters et al (2007) | Plant Physiology et Biochemistry | Sanger sequencing service |
| 13 | Epigenetic Inactivation of the Dioxin- Responsive Cytochrome P4501A1 Gene in Human Prostate Cancer |
Okino et al (2006) | Cancer Res August 1, 2006 66; 7420 | Sanger sequencing service |
| 14 | Impacts of nitrogen-containing coagulants on the nitritation/denitrification of anaerobic digester centrate | Zhiyue Wang, ab Yinuo Yao, ab Nick Steiner,c Hai-Hsuan Cheng, d Yi-ju Wu,d Sung-Geun Wooab and Craig S. Criddle | Environmental Science: Water Research & Technology | MCNextTM SYBR® 99 Fast qPCR Library 100 Quantification Kit |
| Topomize Amplicon Library Prep Kits (MCLAB, South San Francisco, CA) | ||||
| Sequenced by MCLAB (NCBI GenBank accession number SUB8325720) | ||||
| 15 | Detection of Leptospira spp. using polymerase chain reaction technique from kidney of Rattus norvegicus from Grenada, West Indies | Bhumika Sharma, Katelyn Thille, Nia Rametta and Ravindra Sharma | International Journal of One Health | Sequencing |
| 16 | Epigenetic Inactivation of the Dioxin-Responsive Cytochrome P4501A1 Gene in Human Prostate Cancer | Steven T. Okino; Deepa Pookot; Long-Cheng Li; Hong Zhao; Shinji Urakami; Hiroaki Shiina; Mikio Igawa; Rajvir Dahiya | Cancer Res (2006) 66 (15): 7420–7428. | Sequencing |
| 17 | Cell free bacterial DNAs in human plasma provide fingerprints for immune-related diseases | Tingting Zhao, Shien Zou, Maoping Chu, Jun Chen, Jie Zhong, Yamao Chen, Jiangao Fan, Ji Qi, Qijun Wang | Medicine in Microecology | DNA amplification Kit |
| I-5™ Hi-Fi DNA Polymerase | ||||
| 18 | Genistein reverses hypermethylation and induces active histone modifications in tumor suppressor gene B‐Cell translocation gene 3 in prostate cancer | Shahana Majid PhD, Altaf A. Dar PhD, Varahram Shahryari MD, Hiroshi Hirata MD, PhD, Ardalan Ahmad MD, Sharanjot Saini PhD, Yuichiro Tanaka PhD, Angela V. Dahiya, Rajvir Dahiya PhD | Cancer Volume 116, Issue 1 | Sequencing |
| 19 | Development of an RAPD-based SCAR marker for smut disease resistance in commercial sugarcane cultivars of Pakistan | Mehwish Khan, Yong–Bao Pan, Javed Iqbal | Crop Protection Volume 94, April 2017, Pages 166-172 |
Sequencing |
| 20 | Biochip Surfaces Containing Recombinant Cell-Binding Domains of Fibronectin | Martynas Gavutis, Gintarė Stankevičienė, Airina Mazėtytė-Godienė, Tadas Jelinskas, Jurgita Vinskienė, Perttu Haimi, Danas Baniulis, Ramūnas Valiokas | Coatings 2022, 12(7), 880 | E. coli DH5 alpha |
| E. coli BL21 (DE3) | ||||
| 21 | First Report of Alternanthera Mosaic Virus Infecting Epiphyllum spp. | L. Wu, L. Zheng, and R. Li | An International Journal of Applied Plant Pathology; VOLUME 103, NUMBER 4 April 2019 |
Sequencing |
| 22 | Whole-exome sequencing in 168 Korean patients with inherited retinal degeneration | Dae Joong Ma, Hyun-Seob Lee, Kwangsoo Kim, Seongmin Choi, Insoon Jang, Seo-Ho Cho, Chang Ki Yoon, Eun Kyoung Lee & Hyeong Gon Yu | BMC Medical Genomics; Volume 14, article number 74, (2021) | Topomize DNA LT Library Prep Kit |
| 23 | Plant Seeds Commonly Host Bacillus spp., Potential Antagonists of Phytopathogens | George Newcombe, Maria Marlin, Edward Barge, Sabrina Heitmann, Mary Ridout & Posy E. Busby | lant Seeds Commonly Host Bacillus spp., Potential Antagonists of Phytopathogens. Microb Ecol 85, 1356–1366 (2023) | Sequencing |
| 24 | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4600675/ | Mohit Sachdeva, Rebecca D. Dodd, Zhiqing Huang, Carole Grenier, Yan Ma, Dina C. Lev, Diana M. Cardona, Susan K. Murphy, David G. Kirsch | Cancer Letters Volume 369, Issue 1, 1 December 2015, Pages 202-211 |
Choo-Choo cloning kit |
| 25 | Chromatin changes on the GSTP1 promoter associated with its inactivation in prostate cancer | Steven T. Okino, Deepa Pookot, Shahana Majid, Hong Zhao, Long-Cheng Li, Robert F. Place, Rajvir Dahiya | Molecular Carcinogenesis. 05 April 2007 | Sequencing |
| 26 | Characterization of cytochrome b from European field isolates of Cercospora beticola with quinone outside inhibitor resistance | Keshav Birla | A Thesis Submitted to the Graduate Faculty of the North Dakota State University of Agriculture and Applied Science | Sequencing |
| 27 | Secreted frizzled-related protein-5 (sFRP-5) is epigenetically downregulated and functions as a tumor suppressor in kidney cancer | Kazumori Kawakami, Soichiro Yamamura, Hiroshi Hirata, Koji Ueno, Sharanjot Saini, Shahana Majid, Yuichiro Tanaka, Ken Kawamoto, Hideki Enokida, Masayuki Nakagawa, and Rajvir Dahiya | Int J Cancer. 1 Feb 2011; 128(3): Pages 541–550. | Sequencing |
| 28 | Generation of human chronic wasting disease in transgenic mice | Zerui Wang, Kefeng Qin2, Manuel V. Camacho, Ignazio Cali, Jue Yuan, Pingping Shen, Justin Greenlee, Qingzhong Kong, James A. Mastrianni2 and Wen‑Quan Zou | Published: 26 September 2021 Volume 9, article number 158, (2021) |
Sequencing |
| 29 | Seedborne Cercospora beticola Can Initiate Cercospora Leaf Spot from Sugar Beet (Beta vulgaris) Fruit Tissue | Rebecca Spanner, Jonathan Neubauer, Thies M. Heick, Michael A. Grusak, Olivia Hamilton, Viviana Rivera-Varas, Ronnie de Jonge, Sarah Pethybridge, Kimberley M. Webb, Gerhard Leubner-Metzger, Gary A. Secor, and Melvin D. Bolton | Published Online:6 Apr 2022 | Sequencing |
| 30 | PCR-BASED DETECTION OF STROBILURIN RESISTANCE IN CERCOSPORA BETICOLA | Melvin D. Bolton, Keshav Birla, Viviana Rivera-Varas, Mohamed F. R. Khan, and Gary Secor | Pest Management Science 69: 35-39 | Sequencing |
| 31 | DNA methylation and histone modifications cause silencing of Wnt antagonist gene in human renal cell carcinoma cell lines | Ken Kawamoto, Hiroshi Hirata, Nobuyuki Kikuno, Yuichiro Tanaka, Masayuki Nakagawa, Rajvir Dahiya | First published: 28 May 2008 | Sequencing |
| 32 | Pharmacogenomics of Cytauxzoon felis Cytochrome b: Implications for Atovaquone and Azithromycin Therapy in Domestic Cats with Cytauxzoonosis | Megan E. Schreeg, Henry S. Marr, Jaime Tarigo, Leah A. Cohn, Michael G. Levy, Adam J. Birkenheuer | ASM Journals Journal of Clinical Microbiology Vol. 51, No. 9 |
Sequencing |
| 33 | Seasonal dynamics of Chironomus transvaalensis populations and the microbial community composition of their egg masses | Rotem Sela, Malka Halpern | Published: 10 January 2020 | Sequencing |
| 34 | Ethylene involvement in the regulation of the H+-ATPase CsHA1 gene and of the new isolated ferric reductase CsFRO1 and iron transporter CsIRT1 genes in cucumber plants | Brian M. Waters, Carlos Lucena, Francisco J. Romera, Gena G. Jester, April N. Wynn, Carmen L. Rojas, Esteban Alcántara, Rafael Pérez-Vicente | Plant Physiology and Biochemistry Volume 45, Issue 5, May 2007, Pages 293-301 |
Sequencing |
| 35 | BTG3 tumor suppressor gene promoter demethylation, histone modification and cell cycle arrest by genistein in renal cancer | Shahana Majid, Altaf A. Dar, Ardalan E. Ahmad, Hiroshi Hirata, Kazumori Kawakami, Varahram Shahryari, Sharanjot Saini, Yuichiro Tanaka, Angela V. Dahiya, Gaurav Khatri, Rajvir Dahiya | Carcinogenesis, Volume 30, Issue 4, April 2009, Pages 662–670 | Sequencing |
| 36 | Bacteriophage predation regulates microbial abundance and diversity in a full-scale bioreactor treating industrial wastewater | Orr H Shapiro, Ariel Kushmaro, Asher Brenner | Published: 19 November 2009 | Sequencing |
| 37 | Pseudomonas cannabina pv. cannabina pv. nov., and Pseudomonas cannabina pv. alisalensis (Cintas Koike and Bull, 2000) comb. nov., are members of the emended species Pseudomonas cannabina (ex Šutič & Dowson 1959) Gardan, Shafik, Belouin, Brosch, Grimont & Grimont 1999 | Carolee T. Bull, Charles Manceau, John Lydon, Hyesuk Kong, Boris A. Vinatzer, Marion Fischer-Le Saux | Systematic and Applied Microbiology Volume 33, Issue 3, April 2010, Pages 105-115 |
Sequencing |
| 38 | Sequences of Seven Complete Genomes of Human Parvovirus B19 | Yuhuan Qiu, Zehui Zhao, Jianming Qiu | Microbiology Resource Announcements Vol. 7, No. 11 |
Sequencing |
| 39 | Profiling and Discovery of Novel miRNAs from Formalin-Fixed, Paraffin-Embedded Melanoma and Nodal Specimens | Zhihai Ma, Weng-Onn Lui, Andrew Fire, Soheil S. Dadras | TECHNICAL ADVANCES| VOLUME 11, ISSUE 5, P420-429, SEPTEMBER 2009 | Sequencing |
| 40 | Complete mitochondrial genome of the sheepshead minnow Cyprinodon variegatus (Cyprinodontiformes: Cyprinodontidae) | Brinda R. Barcelon and Sean C. Lema | Pages 2610-2612 | Received 07 Apr 2015, Accepted 12 Apr 2015, Published online: 29 May 2015 | Sequencing |
| 41 | Neisseria gonorrhoeae and extended-spectrum cephalosporins in California: surveillance and molecular detection of mosaic penA | Severin Gose, Duylinh Nguyen, Daniella Lowenberg, Michael Samuel, Heidi Bauer & Mark Pandori | Published: 04 December 2013 Volume 13, article number 570, (2013) |
Sequencing |
| 42 | Schistosoma mansoni ex vivo lung-stage larvae excretory–secretory antigens as vaccine candidates against schistosomiasis | Rashika El Ridi, Hatem Tallima | Vaccine Volume 27, Issue 5, 29 January 2009, Pages 666-673 |
RT-PCR products |
| 43 | Wnt antagonist DICKKOPF-3 (Dkk-3) induces apoptosis in human renal cell carcinoma | Koji Ueno, Hiroshi Hirata, Shahana Majid, Yi Chen, Mohd S. Zaman, Z. Laura Tabatabai, Yuji Hinoda, Rajvir Dahiya | First published: 25 January 2011 | Sequencing |
| 44 | Genotyping of STR and DIP–STR Markers in Plasma Cell-Free DNA for Simple and Rapid Noninvasive Prenatal Diagnosis of Zygosity of Twin Pregnancies | Agnieszka Dziennik, Krzysztof Preis, Małgorzata Świątkowska-Freund and Krzysztof Rębała |
Published online by Cambridge University Press: 17 October 2019 | Orange DNA Size Standard |
| NanoPOP-4 polymer | ||||
| Super-DI Formamide | ||||
| 45 | The enhancement of CRISPR/Cas9 gene editing using metformin | Jaedyn L. Rollins, Raquel M. Hall, Clara J. Lemus, Lauren A. Leisten, Jennifer M. Johnston | Biochemistry and Biophysics Reports Volume 35, September 2023, 101539 |
Sequencing |
| 46 | MicroRNA-1826 targets VEGFC, beta-catenin (CTNNB1) and MEK1 (MAP2K1) in human bladder cancer | Hiroshi Hirata, Yuji Hinoda, Koji Ueno, Varahram Shahryari, Z.Laura Tabatabai, Rajvir Dahiya | Carcinogenesis, Volume 33, Issue 1, January 2012, Pages 41–48 | Sequencing |
| 47 | Association of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Elements with Specific Serotypes and Virulence Potential of Shiga Toxin-Producing Escherichia coli | Magaly Toro, Guojie Cao, Wenting Ju, Marc Allard, Rodolphe Barrangou, Shaohua Zhao, Eric Brown, Jianghong Meng | Research Article 30 January 2014 |
Sequencing |
| 48 | High-efficiency CRISPR induction of t(9;11) chromosomal translocations and acute leukemias in human blood stem cells | Johan Jeong, Astraea Jager, Pablo Domizi, Mara Pavel-Dinu, Linda Gojenola, Masayuki Iwasaki, Michael C. Wei, Feng Pan, James L. Zehnder, Matthew H. Porteus, Kara L. Davis, Michael L. Cleary | Blood Adv v.3(19); 2019 Oct 8 | Sequencing |
| 49 | Rational improvement of simvastatin synthase solubility in Escherichia coli leads to higher whole-cell biocatalytic activity | Xinkai Xie, Inna Pashkov, Xue Gao, Jennifer L. Guerrero, Todd O. Yeates, Yi Tang | Biotechnol Bioeng. 2009 Jan 1; 102(1): 20–28. | Sequencing |
| 50 | Different IS629 Transposition Frequencies Exhibited by Escherichia coli O157:H7 Strains in the Stepwise Evolutionary Model | Lydia V. Rump, Markus Fischer, Narjol González-Escalona | Research Article 7 July 2011 |
Sequencing |
| 51 | Synthetic Ligands Discovered by in Vitro Selection | S. Jarrett Wrenn, Rebecca M. Weisinger, David R. Halpin, and Pehr B. Harbury | J Am Chem Soc. 2007 Oct 31; 129(43): 13137–13143 | Sequencing |
| 52 | CALIFORNIA LEAFY GREENS RESEARCH BOARD | Polly Goldman, Ryan Hayes, and Beiquan Mou, USDA/ARS; Steven T. Koike, UCCE | Development and use of tools to aide in the development of management strategies for corky root of lettuce |
Sequencing |
| 53 | A microfluidic-based genetic screen to identify microbial virulence factors that inhibit dendritic cell migration | Laura M. McLaughlin, Hui Xu, Sarah E. Carden, Samantha Fisher, Monique Reyes, Sarah C. Heilshorn, Denise M. Monack | Integrative Biology, Volume 6, Issue 4, April 2014, Pages 438–449 | Sequencing |
| 54 | Calculation and implementation of sample-wide stochastic thresholds for forensic genetic analysis of STRs and SNPs for massively parallel sequencing platforms | Kathryn Stephens, June Snedecor, Bruce Budowle | Volume 8, December 2022, Pages 88-90 | 9948 Genomic DNA |
| 55 | Cytauxzoon felis in a Post-Genomic Era: Taxonomy, Diagnosis, Treatment, and Prevention. | Schreeg, M. E., Marr, H. S., Tarigo, J., Cohn, L. A., & Levy, M. G. Adam J. Birkenheuer | . North Carolina State University College of Veterinary Medicine, Raleigh, NC. 2. University of Missouri, College of Veterinary Medicine, Columbia, MO. | Sequencing |
| 56 | Genetic diversity and evolution of Salmonella enterica serovar Enteritidis strains with different phage types | Jie Zheng, James Pettengill, Errol Strain, Marc W. Allard, Rafiq Ahmed, Shaohua Zhao, Eric W. Brown |
Journal of clinical microbiology 52.5 (2014): 1490-1500.
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| 57 | Hyperactive human glucocorticoid receptor isoforms and their implications for the stress response | Lasker, Michael V.; Leventhal, Stacey M.; Lim, Debora; Green, Tajia L.; Tung, Kelly; Cho, Kiho; Greenhalgh, David G. | Shock, 43(3), 228-232. | Sequencing |
| 58 | Potential of DNA zygosity tests for non-invasive evaluation of risk of complications in twin pregnancies |
Agnieszka Dziennik, Krzysztof Preis, Malgorzata Swiatkowska-Freund, Krzysztof Rebala |
Ginekologia Polska Vol 93, No 4 (2022) Potential of DNA zygosity tests for non-invasive evaluation of risk of complications in twin pregnancies |
Super-DI Formamide |
| NanoPOP-4 polymer | ||||
| 59 | Production of Proteins of the SARS-CoV-2 Proteome for Drug Discovery | Choon Kim, Kiran V. Mahasenan, Atul Bhardwaj, Olaf Wiest, Mayland Chang, and Shahriar Mobashery* | Publication Date:July 20, 2021 | His-tagged TEV protease |
| 60 | Staphylococcus aureus Superantigen-Like Protein SSL1: A Toxic Protease | Aihua Tang,Armando R. Caballero,Michael A. Bierdeman,Mary E. Marquart,Timothy J. Foster,Ian R. Monk,and Richard J. O’Callaghan | Pathogens 2019, 8(1), 2 | Sequencing |
| 61 | Development of redox-sensitive red fluorescent proteins for imaging redox dynamics in cellular compartments | Yichong Fan & Hui-wang Ai | Volume 408, pages 2901–2911, (2016) | Ni-NTA agarose beads |
| 62 | Selection of Type I and Type II methanotrophic proteobacteria in a fluidized bed reactor under non-sterile conditions | Andrew R. Pfluger, Wei-Min Wu, Allison J. Pieja, Jonathan Wan, Katherine H. Rostkowski, Craig S. Criddle | Volume 102, Issue 21, November 2011, Pages 9919-9926 | PCR Centrifugal Filter Device Analysis |